Publications

High-throughput analysis of lipidomic phenotypes of methicillin-resistant Staphylococcus aureus by coupling in situ 96-well cultivation and HILIC-ion mobility-mass spectrometry. Zhang R, Ashford NK, Li A, Ross DH, Werth BJ, Xu L. Anal Bioanal Chem. 2023 Aug 3. doi: 10.1007/s00216-023-04890-6. Online ahead of print.

Elucidating the Impact of Bacterial Lipases, Human Serum Albumin, and FASII Inhibition on the Utilization of Exogenous Fatty Acids by Staphylococcus aureus. Pruitt EL, Zhang R, Ross DH, Ashford NK, Chen X, Alonzo F, Bush MF, Werth BJ, Xu L. bioRxiv. 2023 Jun 30:2023.06.29.547085. doi: 10.1101/2023.06.29.547085. Preprint.

Tracking the Metabolic Fate of Exogenous Arachidonic Acid in Ferroptosis Using Dual-Isotope Labeling Lipidomics Reimers N, Do Q, Zhang R, Guo A, Ostrander R, Shoji A, Vuong C, Xu L bioRxiv 2023.05.28.542640; doi: https://doi.org/10.1101/2023.05.28.542640 [Preprint]

Differential Contributions of Distinct Free Radical Peroxidation Mechanisms to the Induction of Ferroptosis. Do Q, Zhang R, Hooper G, Xu L. JACS Au. 2023 Mar 4;3(4):1100-1117. doi: 10.1021/jacsau.2c00681. eCollection 2023 Apr 24.

Evolution of Enterococcus faecium in Response to a Combination of Daptomycin and Fosfomycin Reveals Distinct and Diverse Adaptive Strategies. Supandy A, Mehta HH, Tran TT, Miller WR, Zhang R, Xu L, Arias CA, Shamoo Y. Antimicrob Agents Chemother. 2022 Jun 21;66(6):e0233321. doi: 10.1128/aac.02333-21. Epub 2022 May 11.

Emergence of Dalbavancin, Vancomycin, and Daptomycin Nonsusceptible Staphylococcus aureus in a Patient Treated With Dalbavancin: Case Report and Isolate Characterization. Zhang R, Polenakovik H, Barreras Beltran IA, Waalkes A, Salipante SJ, Xu L, Werth BJ. Clin Infect Dis. 2022 Oct 29;75(9):1641-1644. doi: 10.1093/cid/ciac341.

Discovery of coordinately regulated pathways that provide innate protection against interbacterial antagonism. Ting SY, LaCourse KD, Ledvina HE, Zhang R, Radey MC, Kulasekara HD, Somavanshi R, Bertolli SK, Gallagher LA, Kim J, Penewit KM, Salipante SJ, Xu L, Peterson SB, Mougous JD. Elife. 2022 Feb 17;11:e74658. doi: 10.7554/eLife.74658.

Synergy Between Beta-Lactams and Lipo-, Glyco-, and Lipoglycopeptides, Is Independent of the Seesaw Effect in Methicillin-Resistant Staphylococcus aureus. Zhang R, Barreras Beltran IA, Ashford NK, Penewit K, Waalkes A, Holmes EA, Hines KM, Salipante SJ, Xu L, Werth BJ. Front Mol Biosci. 2021 Sep 9;8:688357. doi: 10.3389/fmolb.2021.688357. eCollection 2021.

Development and Application of a Peroxyl Radical Clock Approach for Measuring Both Hydrogen-Atom Transfer and Peroxyl Radical Addition Rate Constants. Do Q, Lee DD, Dinh AN, Seguin RP, Zhang R, Xu L. J Org Chem. 2021 Jan 1;86(1):153-168. doi: 10.1021/acs.joc.0c01920. Epub 2020 Dec 3.

LiPydomics: A Python Package for Comprehensive Prediction of Lipid Collision Cross Sections and Retention Times and Analysis of Ion Mobility-Mass Spectrometry-Based Lipidomics Data. Ross DH, Cho JH, Zhang R, Hines KM, Xu L. Anal Chem. 2020 Nov 17;92(22):14967-14975. doi: 10.1021/acs.analchem.0c02560. Epub 2020 Oct 29.

Proteomic and Metabolic Elucidation of Solar-Powered Biomanufacturing by Bio-Abiotic Hybrid System. Zhang R, He Y, Yi J, Zhang L, Shen C, Liu S, Liu L, Liu B, Qiao L. Chem. 2020 Jan 9;6(1):234-49. doi: 10.1016/j.chempr.2019.11.002